Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_014389: Butyrivibrio proteoclasticus B316 plasmid pCY360, complete

NCBI: NC_014389

Host Lineage: Butyrivibrio proteoclasticus; Butyrivibrio; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Butyrivibrio proteoclasticus, formerly Clostridium proteoclasticum, was isolated from rumen contents of a cow. This organism is highly proteolytic and therefore probably involved in the degradation of proteins in the rumen.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
135300037549922500Island text1.5784915.819610.3931Neighbours21BLASTN353000.gbk