Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014387: Butyrivibrio proteoclasticus B316 chromosome 1, complete genome

NCBI: NC_014387

Host Lineage: Butyrivibrio proteoclasticus; Butyrivibrio; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Butyrivibrio proteoclasticus, formerly Clostridium proteoclasticum, was isolated from rumen contents of a cow. This organism is highly proteolytic and therefore probably involved in the degradation of proteins in the rumen.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
179808*10161621809Island text1.5214624.662637.666Neighbours21BLASTN79808.gbk
2177308*19619518888Island text2.4912725.203724.7046Neighbours21BLASTN+177308.gbk
3281157*29978118625Island text1.8167725.657945.6119Neighbours21BLASTN281157.gbk
449788357954081658Island text2.1918726.240630.654Neighbours21BLASTN+497883.gbk
560571162382818118Island text1.6203625.592845.0055Neighbours21605711.gbk
6719245*74009920855Island text2.0202927.652845.765Neighbours21BLASTN719245.gbk
7993013101509922087Island text2.3219925.941729.0984Neighbours21BLASTN+IslandViewer 993013.gbk
81106901*112756620666Island text1.5871926.637537.75Neighbours21+1106901.gbk
91175927*120709031164Island text1.4888628.098339.4943Neighbours21BLASTN1175927.gbk
101362440138810225663Island text2.558326.529425.7386Neighbours21BLASTN+IslandViewer 1362440.gbk
111528000*154757619577Island text2.813129.908848.0375Neighbours21BLASTN1528000.gbk
122297304*231775920456Island text1.5150125.753940.1023Neighbours21IslandViewer 2297304.gbk
132661496269846936974Island text2.2763927.195128.4447Neighbours21BLASTN2661496.gbk
142869914*289460624693Island text2.1720126.723637.9462Neighbours21BLASTN2869914.gbk
153227875*325318125307Island text1.5170425.012242.7153Neighbours21BLASTN+3227875.gbk