Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_014375: Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome

NCBI: NC_014375

Host Lineage: Brevundimonas subvibrioides; Brevundimonas; Caulobacteraceae; Caulobacterales; Proteobacteria; Bacteria

General Information: Environment: Fresh water; Temp: Mesophile; Isolation: fresh water. Brevundimonas subvibrioides (formerly Caulobacter subvibrioides) is a non-budding prosthecate bacterial species.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
121761224296425353Island text1.970217.048620.7704Neighbours11BLASTN+217612.gbk
21146328*117709930772Island text2.4711918.835122.3127Neighbours11BLASTNIslandViewer 1146328.gbk
31242750127333230583Island text1.8953415.687818.6168Neighbours11BLASTN+IslandViewer 1242750.gbk