Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_014374: Acidilobus saccharovorans 345-15 chromosome, complete genome

NCBI: NC_014374

Host Lineage: Acidilobus saccharovorans; Acidilobus; Acidilobaceae; Acidilobales; Crenarchaeota; Archaea

General Information: Acidilobus saccharovorans is an anaerobic thermoacidophilic crenarchaeon isolated from a hot spring of Uzon Caldera, Kamchatka, Russia. Acidophilic hyperthermophile. Members of this genus have been isolated from acidic hot spring environments and may make up a significant part of the microbial community in these environments.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1193391*25259959209Island text1.7508833.060928.8835Neighbours15BLASTN193391.gbk
2264563*28259918037Island text1.6040631.882329.9123Neighbours15BLASTN+264563.gbk
3318528*34188823361Island text1.6708732.915227.8107Neighbours15BLASTN318528.gbk
4344500*37447229973Island text1.674731.617833.8324Neighbours15BLASTN344500.gbk
566935669064021285Island text1.6590234.995922.339Neighbours15669356.gbk
61013184*103717323990Island text1.6490933.633820.1681Neighbours15BLASTN1013184.gbk
71072218*1182281110064Island text1.7252132.859935.1732Neighbours15BLASTN+1072218.gbk