Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014371: Prevotella melaninogenica ATCC 25845 chromosome chromosome II,

NCBI: NC_014371

Host Lineage: Prevotella melaninogenica; Prevotella; Prevotellaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: Prevotella melaninogenica, formerly called Bacteroides melaninogenicus, is a gram-negative, anaerobic, rod-shaped bacterium that inhabits the oral cavity.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1177536*21946141926Island text1.5119133.153435.1638Neighbours312BLASTN+177536.gbk
284919888585036653Island text1.6612630.674740.773Neighbours21BLASTN+849198.gbk
388904391248723445Island text1.6083331.425639.5338Neighbours312BLASTN+889043.gbk
41076642109772421083Island text2.6559927.344424.4092Neighbours21BLASTN+1076642.gbk
51218813124146022648Island text1.6263427.152426.6622Neighbours21BLASTN1218813.gbk
61328500134744818949Island text1.5363734.701346.4409BLASTN1328500.gbk
71358615138199923385Island text1.6854528.058130.264Neighbours21BLASTN1358615.gbk