Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014370: Prevotella melaninogenica ATCC 25845 chromosome chromosome I,

NCBI: NC_014370

Host Lineage: Prevotella melaninogenica; Prevotella; Prevotellaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: Prevotella melaninogenica, formerly called Bacteroides melaninogenicus, is a gram-negative, anaerobic, rod-shaped bacterium that inhabits the oral cavity.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
188593794922363287Island text1.8144434.873644.3102Neighbours312BLASTN+885937.gbk
21117283114097723695Island text3.0748326.290923.1097Neighbours21BLASTN1117283.gbk