Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014254: Methanohalobium evestigatum Z-7303 plasmid pMETEV01, complete

NCBI: NC_014254

Host Lineage: Methanohalobium evestigatum; Methanohalobium; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: Isolation: Microbial mat community in Crimea, Russia; Country: Russia; Temp: Thermophile; Temp: 50C; Habitat: Fresh water; Isolation: mud from a salt lagoon. This is a species of extremely halophilic, methylotrophic, methanogenic, anaerobic bacteria.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1181934511026918Island text2.7726324.001536.6579Neighbours21BLASTN+18193.gbk
213295716156328607Island text1.9712821.745434.9247Neighbours21BLASTN+132957.gbk