Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014225: Waddlia chondrophila WSU 86-1044 chromosome, complete genome

NCBI: NC_014225

Host Lineage: Waddlia chondrophila; Waddlia; Waddliaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Waddlia chondrophila, a novel member of the Chlamydiales order, an obligate intracellular bacterium, it may represent an agent of miscarriage in humans and abortion in ruminants.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
11403007*142895325947Island text1.4871324.623147.1617Neighbours350BLASTN+1403007.gbk