Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014207: Methylotenera sp. 301 chromosome, complete genome

NCBI: NC_014207

Host Lineage: Methylotenera versatilis; Methylotenera; Methylophilaceae; Methylophilales; Proteobacteria; Bacteria

General Information: Methylotenera sp. (strain 301) is an obligate methylotrophic Gram-negative bacterium specialized in degradation of organic compounds containing no carbon-carbon bonds (C1 compounds), most prominently methanol and methylamine. This ubiquitous bacterium has been detected in marine, freshwater, acid mine drainage, polluted soil, sedimentary rock and glacier environments, consistent with an important role in global carbon cycling.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
150037353009929727Island text1.4969327.684233.9481BLASTN500373.gbk
21366766*138884822083Island text2.0594724.674726.3095Neighbours21BLASTNIslandViewer 1366766.gbk