Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014136: Leuconostoc kimchii IMSNU11154 chromosome, complete genome

NCBI: NC_014136

Host Lineage: Leuconostoc kimchii; Leuconostoc; Leuconostocaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Leuconostoc kimchii is a member of the lactic acid producing microbial community involved in the fermentation of kimchi, a fermented cabbage dish from Korea. This organism along with other lactic acid bacteria like Leuconostoc mesenteroides and Lactobacillus brevis produce environmental conditions necessary for the successful fermentation of the cabbage.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
132948437546245979Island text1.728720.225337.75Neighbours21BLASTN+IslandViewer 329484.gbk
21879049189866619618Island text1.5570619.722841.022Neighbours21BLASTN+1879049.gbk