Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014109: Candidatus Riesia pediculicola USDA chromosome, complete genome

NCBI: NC_014109

Host Lineage: Riesia pediculicola; Riesia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Riesia pediculicola is a bacterial symbiont of the human body louse Pediculus humanus. This organism is associated with the stomach disc in the louse and is essential for the survival and growth of the host.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
127500*5209924600Island text2.6841220.909927.3643Neighbours21BLASTN27500.gbk
2326500*35189925400Island text2.215918.267318.9788Neighbours21BLASTN326500.gbk
3393500*43671343214Island text1.7674414.768217.1129Neighbours21BLASTN393500.gbk