Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_014019: Bacillus megaterium QM B1551 chromosome, complete genome

NCBI: NC_014019

Host Lineage: Bacillus megaterium; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Bacillus megaterium is a naturally occurring soil bacterium, originally named because of its large size in relation to E. coli. This bacterium produces a number of useful enzymes, such as, amylases and proteases which have industrial uses. In addition this organism can be used for the production and export of other economically important compounds.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
12661000267903518036Island text2.2368121.428142.155Neighbours21BLASTN+2661000.gbk
22711500*273601324514Island text1.6525127.425839.1231Neighbours21BLASTN2711500.gbk
33213599323332419726Island text1.5866822.127334.8459Neighbours21BLASTN3213599.gbk
43543389356611222724Island text1.4480623.571338.9877Neighbours21BLASTN3543389.gbk
54094750*411477420025Island text1.581322.525536.797Neighbours21BLASTN4094750.gbk