Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014004: Candidatus Sulcia muelleri DMIN chromosome, complete genome

NCBI: NC_014004

Host Lineage: Sulcia muelleri; Sulcia; ; Flavobacteriales; Bacteroidetes; Bacteria

General Information: This organism is a gut symbiont of the Blue-Green Sharpshooter and several other leafhopper species. It synthesizes amino acids for the host, enabling the leafhopper to live on a diet of plant sap. The Blue-Green Sharpshooter is an important vector for Pierce's Disease in plants, caused by the spread of Xylella fastidiosa.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
11*1849218492Island text2.0835310.60927.93032Neighbours21BLASTN1.gbk
266631*8870622076Island text2.722116.321127.3683Neighbours21BLASTN66631.gbk