Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_013946: Meiothermus ruber DSM 1279 chromosome, complete genome

NCBI: NC_013946

Host Lineage: Meiothermus ruber; Meiothermus; Thermaceae; Thermales; Deinococcus-Thermus; Bacteria

General Information: Isolation: Hot spring; Temp: Thermophile; Temp: 50 - 60C; This organism is a pigmented thermophilic bacterium which can be found in hot springs. Thermophilic, aerobic, non-motile, free-living, Gram-negative.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
130536432918623823Island text1.6823919.562924.5292Neighbours111BLASTN+305364.gbk
2415028*44572730700Island text1.7008325.399626.4302Neighbours111BLASTN+415028.gbk
3879199*90227423076Island text1.4776218.713524.9482Neighbours111BLASTN879199.gbk
42050871207864727777Island text2.8773430.854541.0467Neighbours111BLASTN2050871.gbk
52854219*287538821170Island text1.6609719.999827.0913Neighbours11BLASTN+2854219.gbk