Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_013739: Conexibacter woesei DSM 14684, complete genome

NCBI: NC_013739

Host Lineage: Conexibacter woesei; Conexibacter; Conexibacteraceae; Solirubrobacterales; Actinobacteria; Bacteria

General Information: Isolation: Forest soil in Gerenzano Italy; Temp: Mesophile; Temp: 28C; Habitat: Soil. Aerobic, non-sporulating Gram-positive bacterium.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1717352*74820730856Island text2.0588718.774319.0205Neighbours11BLASTN+IslandViewer 717352.gbk
22057781*208021522435Island text1.4105811.873811.0976Neighbours11BLASTN+2057781.gbk
32106662*213745830797Island text2.3469817.000311.4315Neighbours11BLASTN+IslandViewer 2106662.gbk
43006719*302916222444Island text1.7089516.086415.6874Neighbours11BLASTNIslandViewer 3006719.gbk
55012394503222219829Island text1.6394415.188514.4147Neighbours11BLASTN+5012394.gbk
65535945556853032586Island text1.7354714.205216.8329Neighbours11BLASTNIslandViewer 5535945.gbk
75705325*573909933775Island text1.8914216.165413.9488Neighbours11BLASTN+IslandViewer 5705325.gbk