Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_013511: Mycoplasma hominis, complete genome

NCBI: NC_013511

Host Lineage: Mycoplasma hominis; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: Mycoplasma hominis strain PG21 was isolated from a human rectal swab. Mycoplasma hominis in a member of the urogenital flora of humans, however, this organism has occasionally been identified as the causative agent of urogenital infections.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1180604356125502Island text1.8127714.111127.2384NeighboursBLASTNIslandViewer 18060.gbk
235854437984521302Island text1.7200512.493121.3709NeighboursBLASTNIslandViewer 358544.gbk
357371759708923373Island text1.6345812.304323.1904Neighbours21BLASTN+IslandViewer 573717.gbk