Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_013454: Blattabacterium sp. (Blattella germanica) str. Bge, complete

NCBI: NC_013454

Host Lineage: Blattabacterium; Blattabacterium; Blattabacteriaceae; Flavobacteriales; Bacteroidetes; Bacteria

General Information: Genomic DNA was isolated from Blattabacteria that were extracted from collected fat body of female adult German cockroach. Endosymbiont of the cockroach Blattella germanica.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1168463*19120322741Island text1.5199611.302819.1143Neighbours21BLASTN168463.gbk
2229587*25413424548Island text1.7082810.058916.2641Neighbours21BLASTN229587.gbk