Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_013283: Cronobacter turicensis plasmid pCTU1, complete sequence

NCBI: NC_013283

Host Lineage: Cronobacter turicensis; Cronobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Cronobacter turicensis is an opportunistic pathogen that can cause infections such as necrotizing enterocolitis, bacteraemia, meningitis and brain abscess/lesions. Gram-negative bacterium. Turicensis is the Latin name of Zurich, as the type strain originates from Zurich, Switzerland.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
111366015249938840Island text2.7730342.15138.6428Neighbours51BLASTN113660.gbk