Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_012968: Methylotenera mobilis JLW8, complete genome

NCBI: NC_012968

Host Lineage: Methylotenera mobilis; Methylotenera; Methylophilaceae; Methylophilales; Proteobacteria; Bacteria

General Information: Methylotenera mobilis is able to utilize methylamines, potentially significant greenhouse gases, as a sole source of energy. Gram-negative bacterium isolated from Lake Washington in Seattle, Washington, USA.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1638988360419707Island text1.5149729.071119.8216Neighbours21BLASTN+IslandViewer 63898.gbk
2239476*26753528060Island text1.6908730.229825.2612Neighbours21BLASTN+IslandViewer 239476.gbk
332552934810422576Island text1.4586228.477648.5808Neighbours43BLASTN+325529.gbk
4381771*40409922329Island text1.486529.948946.8693Neighbours43BLASTN+381771.gbk
543553246033724806Island text1.4420329.663220.4532Neighbours42BLASTN435532.gbk
6507988*53163623649Island text1.6618930.736922.0867Neighbours21BLASTN+IslandViewer 507988.gbk
786546588774822284Island text1.9877629.80521.3059Neighbours21BLASTNIslandViewer 865465.gbk
81108687*113956830882Island text2.4797333.511227.1135Neighbours21BLASTN+IslandViewer 1108687.gbk
91191037121136620330Island text1.8206828.193920.578Neighbours21BLASTN1191037.gbk
101352463*137108218620Island text1.5094630.265134.1698Neighbours21BLASTN1352463.gbk
111594954163297838025Island text2.126433.301820.7137Neighbours21BLASTN+IslandViewer 1594954.gbk
121731976*175455122576Island text1.4454730.429252.6495Neighbours42BLASTN1731976.gbk
131945614197076325150Island text1.8670829.754834.3069Neighbours21BLASTNIslandViewer 1945614.gbk
142000218*202098120764Island text1.8557128.731530.6473Neighbours21BLASTN+IslandViewer 2000218.gbk
152228943*225222323281Island text1.5654428.556725.4903Neighbours21BLASTN2228943.gbk