Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_012441: Brucella melitensis ATCC 23457 chromosome I, complete sequence

NCBI: NC_012441

Host Lineage: Brucella melitensis; Brucella; Brucellaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Brucella melitensis ATCC 23457 (isolate 84) was obtained from human blood and bone marrow samples. This organism is a facultative intracellular bacteria that causes abortion in wild and domestic animals, usually goats or sheep, and undulant fever in humans. Brucellosis is a major health problem in the Mediterranean region and parts of Asia, Africa, and Latin America, where it causes severe economic losses. The disease is transmitted to humans by nonpasteurized milk and milk products or by direct contact with infected animals or carcasses.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1264795*28817823384Island text1.6053829.831427.5221Neighbours11BLASTNIslandViewer 264795.gbk
2529500*55498725488Island text2.0402628.592831.3108Neighbours41BLASTN+IslandViewer 529500.gbk
372750074559918100Island text1.4994830.058420.6268Neighbours11BLASTN+IslandViewer 727500.gbk
4956609*98209725489Island text1.7115532.634326.7066Neighbours11BLASTN+IslandViewer 956609.gbk
51940545*196583925295Island text1.7717830.232932.6434Neighbours41BLASTNIslandViewer 1940545.gbk