Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011973: Bacillus cereus Q1 plasmid pBc239, complete sequence

NCBI: NC_011973

Host Lineage: Bacillus cereus; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Isolated from a deep-subsurface oil reservoir in the Daqing oil field in northeastern China. This strain is non-pathogenic, and has potential for industrial use. Bacillus cereus is a Gram-positive, spore-forming bacterium of the B.cereus group. It is closely related to Bacillus anthracis and Bacillus thuringiensis. Bacillus cereus is a ubiquitous soil organism and opportunistic human pathogen most commonly associated with food poisoning, causing diarrheic (late onset) or emetic (quick onset) outbreaks.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1707649574124978Island text1.5314923.851533.9024Neighbours21BLASTN70764.gbk
212050014067420175Island text3.0741418.052332.9435Neighbours21BLASTN120500.gbk