Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011969: Bacillus cereus Q1 chromosome, complete genome

NCBI: NC_011969

Host Lineage: Bacillus cereus; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Isolated from a deep-subsurface oil reservoir in the Daqing oil field in northeastern China. This strain is non-pathogenic, and has potential for industrial use. Bacillus cereus is a Gram-positive, spore-forming bacterium of the B.cereus group. It is closely related to Bacillus anthracis and Bacillus thuringiensis. Bacillus cereus is a ubiquitous soil organism and opportunistic human pathogen most commonly associated with food poisoning, causing diarrheic (late onset) or emetic (quick onset) outbreaks.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
172636974529818930Island text3.1102428.603447.4516Neighbours21BLASTN+726369.gbk
21084000*110509921100Island text1.9686123.230836.9533Neighbours21BLASTN+IslandViewer 1084000.gbk
31181302120413622835Island text1.6133328.016937.3457Neighbours21BLASTN1181302.gbk
41437514146055523042Island text2.8062727.674940.2385Neighbours21BLASTN1437514.gbk
51615936163661220677Island text4.1149931.123849.8051BLASTN1615936.gbk
61816746184129724552Island text1.5410125.07935.0408Neighbours21BLASTN+1816746.gbk
72706000272872322724Island text3.5955932.604148.605Neighbours21BLASTN2706000.gbk
83106500312735720858Island text1.7022125.892439.0996Neighbours21BLASTN+3106500.gbk
93401916342302421109Island text1.5171724.580533.9749Neighbours21BLASTN+IslandViewer 3401916.gbk
103549000*357086221863Island text1.803523.382842.4412Neighbours21BLASTN3549000.gbk
113575988*359703321046Island text1.56424.561235.2235Neighbours21BLASTN3575988.gbk
123627980*365573327754Island text1.7840221.808138.3116Neighbours21BLASTN3627980.gbk
133657360368115723798Island text1.6301123.370637.197Neighbours21BLASTN3657360.gbk
143879412390214222731Island text1.5327135.913247.9139Neighbours21BLASTN+3879412.gbk
154001489*402447622988Island text1.5732127.623632.1939Neighbours21BLASTN4001489.gbk
164065460*408856123102Island text1.654124.698431.2117Neighbours21BLASTN4065460.gbk
174140000*418017840179Island text1.5095824.759830.6584Neighbours21BLASTNIslandViewer 4140000.gbk
184235818425890023083Island text1.6795325.664836.2397Neighbours21BLASTN+4235818.gbk
194396000*441834622347Island text1.8401223.081835.8387Neighbours21BLASTN4396000.gbk
204432454445498122528Island text1.6958323.054530.8564Neighbours21BLASTN+4432454.gbk
214556296*458076824473Island text1.7086523.543934.1028Neighbours21BLASTN4556296.gbk
224613430*463365820229Island text1.6745823.106233.7435Neighbours21BLASTN4613430.gbk
234655602467819222591Island text1.5957622.930327.7068Neighbours21BLASTN+4655602.gbk
244680836470259921764Island text1.5801722.765735.0652Neighbours21BLASTN+4680836.gbk
254802500*482114718648Island text1.7419223.556138.6466Neighbours21BLASTN+4802500.gbk
264841358*487831636959Island text1.7786628.079244.0537Neighbours21BLASTN+4841358.gbk
274945441*496309917659Island text1.6300525.334935.6344Neighbours21BLASTN+4945441.gbk
284993386*505021356828Island text3.9181840.801344.737Neighbours21BLASTN+4993386.gbk
295063283*508251019228Island text1.5983424.285629.7123Neighbours21BLASTN+5063283.gbk