Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011892: Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete

NCBI: NC_011892

Host Lineage: Methylobacterium nodulans; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Methylobacterium nodulans was isolated from root nodules from the legume Crotalaria, a large Fabaceae group found in Africa. Methylobacterium nodulans fixes nitrogen and can grow with C1 compounds, such as methanol and formate, as a sole carbon source.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
17797512040642432Island text1.7871618.716417.8396Neighbours11BLASTN+77975.gbk
230643732536818932Island text1.5046318.020413.0101Neighbours11BLASTN+306437.gbk
335265237609923448Island text1.5315116.518723.5717Neighbours11BLASTN+352652.gbk