Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_011887: Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete

NCBI: NC_011887

Host Lineage: Methylobacterium nodulans; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Methylobacterium nodulans was isolated from root nodules from the legume Crotalaria. Methylobacterium nodulans fixes nitrogen and can grow with C1 compounds, such as methanol and formate, as a sole carbon source.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1723649735524992Island text1.7426718.733918.0321Neighbours11BLASTN+72364.gbk
211061813688826271Island text1.7954621.696319.6605Neighbours11BLASTN+110618.gbk