Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011881: Arthrobacter chlorophenolicus A6 plasmid pACHL02, complete

NCBI: NC_011881

Host Lineage: Arthrobacter chlorophenolicus; Arthrobacter; Micrococcaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Arthrobacter chlorophenolicus A6 (DSM 12829) was isolated from soil at Fort Collins, Colorado, USA and is able to use 4-chlorophenol as a sole source of carbon and energy. This organism can degrade 4-chlorophenol in soil at temperatures ranging from 5 to 28 degrees C making it a good candidate for bioremediation. Arthrobacter chlorophenolicus can degrade high concentrations of para-substituted phenols, such as 4-chlorophenol and 4-nitrophenol and can survive under harsh conditions, such as cold temperature and during starvation in soil.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
111759917599Island text1.7020926.912523.7744Neighbours11BLASTN+1.gbk
2466546881522162Island text1.5348522.765732.9486Neighbours11BLASTN46654.gbk
38970511227022566Island text1.4225221.777726.0994Neighbours11BLASTN89705.gbk