Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011667: Thauera sp. MZ1T plasmid pTha01, complete sequence

NCBI: NC_011667

Host Lineage: Thauera; Thauera; Rhodocyclaceae; Rhodocyclales; Proteobacteria; Bacteria

General Information: Gram-negative bacterium, was isolated from activated sludge samples from the industrial wastewater treatment facility of Eastman Chemical Company, Kingsport, Tennessee USA.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
11*1990019900Island text1.5561419.81424.7198Neighbours11BLASTN+1.gbk