Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011666: Methylocella silvestris BL2, complete genome

NCBI: NC_011666

Host Lineage: Methylocella silvestris; Methylocella; Beijerinckiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Methylocella silvestris was isolated from acidic forest soil near Marburg, Germany. This organism is a facultative methanotroph, able to grow on organic acids and alcohols as well as methane.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
11572487160176329277Island text1.8611430.420322.2543Neighbours11BLASTN+IslandViewer 1572487.gbk
21601983162289320911Island text1.5715628.089724.9056Neighbours11BLASTN+IslandViewer 1601983.gbk
31661491*168514023650Island text1.4568625.960619.4543Neighbours11BLASTN+1661491.gbk
41923776*194844124666Island text1.3381527.997326.745Neighbours11BLASTN+1923776.gbk
52109274*213911129838Island text1.6284925.62627.6808Neighbours11BLASTNIslandViewer 2109274.gbk
62259447*228593326487Island text3.3643337.883419.0934Neighbours11BLASTN+IslandViewer 2259447.gbk
72335765235876623002Island text1.4900529.979317.2737Neighbours11BLASTN+IslandViewer 2335765.gbk
82435438*245809922662Island text1.41428.945828.7733Neighbours11BLASTN2435438.gbk
93001513302603924527Island text1.6648729.374719.5179Neighbours11BLASTN+IslandViewer 3001513.gbk