Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011661: Dictyoglomus turgidum DSM 6724, complete genome

NCBI: NC_011661

Host Lineage: Dictyoglomus turgidum; Dictyoglomus; Dictyoglomaceae; Dictyoglomales; Dictyoglomi; Bacteria

General Information: An extremely thermophilic bacterium isolated from a hot spring in the Uzon volcano caldera in Kamchatka.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
120392922964425716Island text1.5073120.130126.1481Neighbours21+203929.gbk
240994342894319001Island text1.7489619.757733.9505Neighbours21BLASTN+409943.gbk
3906583*92459918017Island text1.5542219.944735.8083NeighboursBLASTN906583.gbk
4938754*95721318460Island text1.5549120.741138.8963Neighbours21BLASTN938754.gbk
5961129*98426123133Island text1.7308821.08440.6633Neighbours21BLASTN+961129.gbk
6998562*101885320292Island text2.0575220.245636.9838Neighbours21BLASTN998562.gbk
71049767106859918833Island text2.2870220.669738.6507Neighbours21BLASTN1049767.gbk
81100576*112031619741Island text1.7917919.692434.3525Neighbours21BLASTN+1100576.gbk
91143787*116669222906Island text1.548820.689439.0182Neighbours21BLASTN+1143787.gbk
101175743*119876723025Island text1.3835520.075429.9976Neighbours21BLASTN+1175743.gbk
111332309*136399631688Island text1.8219220.026136.7676Neighbours21BLASTN1332309.gbk
121411383*143358622204Island text1.7612619.259738.1926Neighbours21BLASTN1411383.gbk
131542335*156160219268Island text1.754220.832338.9024Neighbours21BLASTN1542335.gbk
141807101183175324653Island text1.5913620.020737.9888Neighbours21BLASTN+1807101.gbk