Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011567: Anoxybacillus flavithermus WK1, complete genome

NCBI: NC_011567

Host Lineage: Anoxybacillus flavithermus; Anoxybacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Anoxybacillus flavithermus, formerly Bacillus flavothermus, was isolated from a hot spring in New Zealand. This organism can tolerate a pH of up to 9.0. Gram-positive bacteria of the genus Anoxybacillus have been found in diverse thermophilic habitats, such as geothermal hot springs and manure, and in processed foods such as gelatin and milk powder.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
11*3972539725Island text1.9730233.493152.4428Neighbours21BLASTN1.gbk
275306*9492919624Island text1.9236233.475254.4057Neighbours31BLASTN75306.gbk
3139598*16123721640Island text1.7911233.056448.6143Neighbours21BLASTN+139598.gbk
4204772*22623221461Island text2.3742136.233249.9543Neighbours31BLASTN+204772.gbk
5238249*26341425166Island text1.8615436.188851.2466Neighbours21BLASTNIslandViewer 238249.gbk
6388358*41678028423Island text2.0354835.612755.4756Neighbours21BLASTN+388358.gbk
72327870*234959921730Island text1.9028635.099452.2764Neighbours21BLASTN+IslandViewer 2327870.gbk
82405000*242309918100Island text3.1401327.450111.2925Neighbours21BLASTN+IslandViewer 2405000.gbk
92468708248978021073Island text1.8509427.993937.9654Neighbours21BLASTN2468708.gbk
102556915*258020723293Island text1.6706130.245645.3862Neighbours31BLASTN+2556915.gbk