Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011297: Dictyoglomus thermophilum H-6-12, complete genome

NCBI: NC_011297

Host Lineage: Dictyoglomus thermophilum; Dictyoglomus; Dictyoglomaceae; Dictyoglomales; Dictyoglomi; Bacteria

General Information: Dictyoglomus thermophilum was isolated from a slightly alkaline hot spring (Tsuetae Hot Spring) in Kumamoto Prefecture, Japan. It is an extremely thermophilic, chemoorganotrophic bacterium.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
129073730909918363Island text1.6551920.932635.4854Neighbours21BLASTN+290737.gbk
241576043809922340Island text1.9920220.318637.9218Neighbours21BLASTN+415760.gbk
3767333*79024322911Island text2.2310428.445443.1359Neighbours21BLASTN767333.gbk
4787932*81069822767Island text1.6222521.560640.3419Neighbours21BLASTN+787932.gbk
5833387*86029326907Island text1.766221.689640.7967Neighbours21BLASTN833387.gbk
61167615*118756319949Island text2.5158622.628343.7418Neighbours21BLASTN1167615.gbk
71224749*125922534477Island text2.9471533.620840.7558Neighbours21BLASTN+1224749.gbk
81296968*132012423157Island text1.7347421.160639.0669Neighbours21BLASTN+1296968.gbk
91357947*138109323147Island text1.7808221.093539.0269Neighbours21BLASTN+1357947.gbk