Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_010693: Erwinia tasmaniensis plasmid pET46, complete sequence

NCBI: NC_010693

Host Lineage: Erwinia tasmaniensis; Erwinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Erwinia tasmaniensis Et1/99 (DSM 17950) was isolated from apple flowers in Tasmania, Australia. Erwinia tasmaniensis has been isolated from apple and pear flowers and bark. This organism is not pathogenic to plants and appears to be a common epiphyte, colonizing plant surfaces.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
112329523295Island text1.8527832.840726.4902Neighbours41BLASTN+1.gbk