Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_010682: Ralstonia pickettii 12J chromosome 1, complete sequence

NCBI: NC_010682

Host Lineage: Ralstonia pickettii; Ralstonia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Ralstonia pickettii 12J was isolated from copper-contaminated sediment from a lake in Michigan, USA. In addition to being highly resistant to copper, strain 12J is also resistant to zinc and cadmium. Ralstonia pickettii can be isolated from a wide range of environmental and clinical samples. This species is a nocosomial pathogen. It is associated with infections caused by contaminated solutions, such as distilled water and intravenous solutions. Ralstonia pickettii strains resistant to heavy metals have also been isolated from heavy metal contaminated environments.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
112474724747Island text1.4226319.74116.9509NeighboursBLASTN+IslandViewer 1.gbk
228841531019821784Island text1.5547322.560525.0365Neighbours11BLASTN+IslandViewer 288415.gbk
346052349696636444Island text1.8001724.625925.1595Neighbours11BLASTN+IslandViewer 460523.gbk
466127268656525294Island text2.294227.095537.1395Neighbours11BLASTNIslandViewer 661272.gbk
570191272480022889Island text1.4521322.519526.7816Neighbours11BLASTN701912.gbk
61234769125559920831Island text1.6876220.731227.3219Neighbours11BLASTN+IslandViewer 1234769.gbk
71482365150027017906Island text1.5501917.488412.9066Neighbours11BLASTN+IslandViewer 1482365.gbk
81593108161728924182Island text1.6531827.211822.7458Neighbours11BLASTN+IslandViewer 1593108.gbk
91624985164886423880Island text1.4498118.555428.3408Neighbours11BLASTNIslandViewer 1624985.gbk
101652636167969627061Island text2.1808532.541430.9488Neighbours11BLASTN+IslandViewer 1652636.gbk
111763769179159927831Island text1.9529126.372827.1355Neighbours11BLASTN+IslandViewer 1763769.gbk
121913941193635322413Island text1.4861518.202818.2909Neighbours11BLASTN+IslandViewer 1913941.gbk
132422500*244223219733Island text1.5527724.243331.7337Neighbours11BLASTN+IslandViewer 2422500.gbk
142642269*266509922831Island text1.7001920.899541.7923Neighbours11BLASTNIslandViewer 2642269.gbk
153033646306386630221Island text1.9919326.658226.7441Neighbours11BLASTN+IslandViewer 3033646.gbk
163313944*336341949476Island text1.5931724.574223.4361Neighbours11BLASTN+IslandViewer 3313944.gbk
173745000376509920100Island text1.6498723.806323.3544Neighbours11BLASTN+IslandViewer 3745000.gbk