Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_010511: Methylobacterium sp. 4-46 chromosome, complete genome

NCBI: NC_010511

Host Lineage: Methylobacterium; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen fixation, Thiosulfate oxidation, Endosymbiont.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1225434*25685731424Island text3.5741821.388214.9046Neighbours11BLASTN+IslandViewer 225434.gbk
263721465868121468Island text1.6609114.660714.4217Neighbours11BLASTN+637214.gbk
387190590774035836Island text2.642218.452117.2099Neighbours11BLASTN+IslandViewer 871905.gbk
4915313*94335128039Island text3.7101822.62515.4146Neighbours11BLASTN+IslandViewer 915313.gbk
51074557*112045445898Island text2.8601216.942217.7799Neighbours11BLASTN+IslandViewer 1074557.gbk
61122529*114083618308Island text1.9645514.317910.4824Neighbours11BLASTN+IslandViewer 1122529.gbk
71273610129530121692Island text2.1488818.743217.6597Neighbours11BLASTN+IslandViewer 1273610.gbk
81351000137819027191Island text1.8932114.427314.0273Neighbours11BLASTN+IslandViewer 1351000.gbk
91590500162830537806Island text3.413220.719319.6422Neighbours11BLASTN+IslandViewer 1590500.gbk
101641416168609944684Island text2.966217.562616.7273Neighbours11BLASTN+IslandViewer 1641416.gbk
111691753171437022618Island text2.0110315.703313.0832Neighbours11BLASTN+IslandViewer 1691753.gbk
122079744*213489255149Island text2.6568316.651111.0156Neighbours11BLASTN+IslandViewer 2079744.gbk
132163570218653522966Island text1.8852914.643121.6226Neighbours11BLASTNIslandViewer 2163570.gbk
142703684*274185238169Island text2.283815.905520.1495Neighbours11BLASTN+IslandViewer 2703684.gbk
152775465280309827634Island text2.1379318.783118.6073Neighbours11BLASTN+IslandViewer 2775465.gbk
163106418*313209925682Island text2.8004114.520515.9885Neighbours11BLASTN+IslandViewer 3106418.gbk
173160123318009919977Island text1.5625614.60067.8755Neighbours11BLASTN+3160123.gbk
183199643*322231822676Island text1.6682415.191714.2219Neighbours11BLASTN+IslandViewer 3199643.gbk
193233884*325656622683Island text1.9999713.697712.6751Neighbours11BLASTN+IslandViewer 3233884.gbk
203674178375267378496Island text2.1131213.673418.7355Neighbours11BLASTN+IslandViewer 3674178.gbk
213947948397022922282Island text2.6891517.432315.6743Neighbours11BLASTN+3947948.gbk
224258000429897740978Island text2.519214.880214.5267Neighbours11BLASTN+IslandViewer 4258000.gbk
234313769434496831200Island text1.9625512.907313.3268Neighbours11BLASTN+IslandViewer 4313769.gbk
244415731443533919609Island text3.2321214.676618.297Neighbours11BLASTN+IslandViewer 4415731.gbk
254450312447731327002Island text4.0544321.108920.3026Neighbours11BLASTN+IslandViewer 4450312.gbk
264696868475209955232Island text2.589314.983116.1383Neighbours11BLASTN+IslandViewer 4696868.gbk
275169338520903439697Island text2.2439514.53068.56377Neighbours11BLASTN+IslandViewer 5169338.gbk
285424004545014026137Island text2.1065113.787411.9381Neighbours11BLASTN+IslandViewer 5424004.gbk
295467009548670119693Island text2.3932515.040814.9953Neighbours11BLASTNIslandViewer 5467009.gbk
306067000*614476477765Island text2.9273714.933418.4838Neighbours11BLASTN+IslandViewer 6067000.gbk
316169468619265723190Island text2.2198515.645112.1794Neighbours11BLASTN+IslandViewer 6169468.gbk
326485500651365628157Island text4.2044323.782715.6965Neighbours11BLASTNIslandViewer 6485500.gbk
336711836673458822753Island text1.6413815.542915.6414Neighbours11BLASTN6711836.gbk
346756000677971823719Island text2.7405414.591416.22Neighbours11BLASTN+IslandViewer 6756000.gbk
357024412*706495640545Island text2.821218.027615.6583Neighbours11BLASTN+IslandViewer 7024412.gbk
367400255742709926845Island text2.4501917.685512.5378Neighbours11BLASTN+IslandViewer 7400255.gbk
377553703*758115427452Island text5.7998124.444118.6423Neighbours11BLASTN+IslandViewer 7553703.gbk