Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_010510: Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete

NCBI: NC_010510

Host Lineage: Methylobacterium radiotolerans; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This methylotrophic species nodulates and fixes nitrogen in symbiosis with legumes. Methylobacterium represents a branch of the Rhizobia which grow facultatively on methanol.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1139685*16159921915Island text3.4895119.766522.0239Neighbours11BLASTN139685.gbk
231093833289021953Island text1.7131314.369512.4193Neighbours11BLASTN+310938.gbk
3339879*37475134873Island text1.7937214.806415.8353Neighbours11BLASTN+339879.gbk
438888540909920215Island text1.9674516.332918.9538Neighbours11BLASTN+388885.gbk
540946942775818290Island text1.9001915.050515.7875Neighbours11BLASTN+409469.gbk
6534024*56059926576Island text4.285519.216121.9135Neighbours11BLASTN+534024.gbk