Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_009715: Campylobacter curvus 525.92 chromosome, complete genome

NCBI: NC_009715

Host Lineage: Campylobacter curvus; Campylobacter; Campylobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: Gastrointestinal clinical isolate. Members of this genus are one of the most common causes of bacterial gastroenteritis (campylobacteriosis). Members of this genus are one of the most common causes of bacterial gastroenteritis (campylobacteriosis). Usually the symptoms are abdominal pain, fever, diarrhea, and cramps, but the illness can sometimes be fatal and some infected individuals develop a syndrome (Guillain-Barre) in which the nerves connecting the spinal cord to the brain are damaged. C. jejuni is the main cause of campylobacteriosis, but other species can also cause infection, including C. coli, C. upsaliensis, and C. curvus.Campylobacter curvus.This species was originally isolated from the human oral cavity in cases of gingivitis; however the role it plays in periodontal disease is unclear. This organism has also been isolated from cases of gastrointestinal disease, and occassionally from abscesses.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1167513*19291925407Island text2.0293826.734122.79BLASTN167513.gbk
239915941743618278Island text1.5212728.331713.0649BLASTN+399159.gbk
3873280*89609922820Island text1.6941633.806536.6629BLASTN+873280.gbk
4905134*93100825875Island text1.6325225.858424.5767BLASTN905134.gbk
51202242123437632135Island text1.564427.523127.4881BLASTN+1202242.gbk
61470419*150399933581Island text3.8731836.560621.1217Neighbours361BLASTN+IslandViewer 1470419.gbk
71829978186867538698Island text1.534538.48839.4141BLASTN+1829978.gbk
81877825*189998422160Island text1.9497732.792119.8982BLASTN1877825.gbk
91923676*194922925554Island text1.6693138.56442.9742BLASTN1923676.gbk