n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)
n0_4mer:D = Distance between local and global OU patterns
n0_4mer:PS = Distance between 2 strands of same DNA molecule
Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS
NC_009511: Sphingomonas wittichii RW1 chromosome, complete genome
NCBI: NC_009511
Host Lineage: Sphingomonas wittichii; Sphingomonas; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria
General Information: Sphingomonas wittichii was isolated from water from the Elbe River in Germany. This organism is able to grow using dibenzo-p-dioxin or dibenzofuran as a sole carbon source. These compounds are widespread environmental contaminants formed as by-products in the manufacture of pesticides and paper, and during the incineration of industrial waste. The enzymes involved in degradation of these substrates is contained, in part, on plasmids in Sphingomonas wittichii.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!