n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)
n0_4mer:D = Distance between local and global OU patterns
n0_4mer:PS = Distance between 2 strands of same DNA molecule
Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS
NC_009486: Thermotoga petrophila RKU-1 chromosome, complete genome
NCBI: NC_009486
Host Lineage: Thermotoga petrophila; Thermotoga; Thermotogaceae; Thermotogales; Thermotogae; Bacteria
General Information: Thermotoga petrophila strain RKU-1 is an anaerobic thermophile, isolated from the production waters of the Kubiki oil reservoir in Niigata, Japan. This organism, a member of the Thermotogales, has the characteristic morphology of one or more cells contained in a sheath-like envelope which extends beyond the cell wall. Preliminary sequencing of Thermotogales genomes has identified extensive horizontal gene transfer between these organisms and the Archaea.