Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_009337: Chlorobium phaeovibrioides DSM 265 chromosome, complete genome

NCBI: NC_009337

Host Lineage: Chlorobium phaeovibrioides; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Nitrogen-fixing photosynthetic bacterium. This organism is unique in its ability to form extracellular sulfur globules from thiosulfate. It is one of the few strains which can use both thiosulfate and tetrathionate as electron donors. Nitrogen fixation.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
18963111209922469Island text1.6327231.742544.5121Neighbours14BLASTN+IslandViewer 89631.gbk
232038934485324465Island text1.671230.739353.4292Neighbours14BLASTN+320389.gbk
371550076625150752Island text2.1236739.585536.3288Neighbours14BLASTN+IslandViewer 715500.gbk
41200722*121966018939Island text1.7393333.45954.895Neighbours34BLASTN+1200722.gbk
51448607146845519849Island text1.5377332.528841.8352Neighbours14BLASTN+1448607.gbk