Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_008783: Bartonella bacilliformis KC583, complete genome

NCBI: NC_008783

Host Lineage: Bartonella bacilliformis; Bartonella; Bartonellaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Cauative agent of Carrion's disease. Like other members of this genus, Bartonella bacilliformis is an obligate intracellular parasite, which infects red blood cells. Bartonella bacilliformis is the causative agent of Carrion's disease, also called Oroya fever. This disease is found in the western Andes of South America, and is transmitted through an insect vector. Carrion's disease is characterized by an acute, febrile, anemia with a mortality of 40 to 90%. The anemic phase may be followed by a milder secondary episode, characterized by wart-like skin lesions.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
129972*5377323802Island text1.9738821.960144.8776Neighbours21BLASTN+29972.gbk
2119758*14350023743Island text1.4898324.276547.5454Neighbours21BLASTN+119758.gbk
314530516819922895Island text1.4149126.003234.2612Neighbours314BLASTN+145305.gbk
4177161*21209934939Island text1.636330.670942.3291Neighbours314BLASTN+177161.gbk
5222000*26359941600Island text1.8103128.298842.0552Neighbours21BLASTN+222000.gbk
6507939*53042222484Island text1.8634922.504341.1256Neighbours21BLASTN507939.gbk
7671349*69609924751Island text1.4992923.723245.7303Neighbours21BLASTN+671349.gbk
81101973*112750625534Island text2.3237133.662846.8824Neighbours21BLASTN+IslandViewer 1101973.gbk