Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_008571: Gramella forsetii KT0803, complete genome

NCBI: NC_008571

Host Lineage: Gramella forsetii; Gramella; Flavobacteriaceae; Flavobacteriales; Bacteroidetes; Bacteria

General Information: Aquatic bacterium. This species was isolated from concentrated seawater collected from the German Bight in the North Sea, during a phytoplankton bloom. Surface waters were sampled weekly, and bacteria were grown on agar plates enriched with synthetic seawater medium.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
118500020530820309Island text1.6100619.742533.5465Neighbours21BLASTN185000.gbk
236504738735222306Island text1.682419.62232.1537Neighbours21BLASTN365047.gbk
3505776*52837622601Island text1.5205720.483235.3852Neighbours21BLASTN505776.gbk
474450076227117772Island text1.6313319.680227.2749Neighbours21BLASTN744500.gbk
5938835101459975765Island text1.8492421.439517.4044Neighbours21BLASTN+IslandViewer 938835.gbk
61374496139425119756Island text1.4930222.118228.5723Neighbours21BLASTN+1374496.gbk
72127369*215091223544Island text1.4268819.728824.1016Neighbours21BLASTN+2127369.gbk
82229369225434724979Island text1.5005421.862833.7191Neighbours21BLASTN+2229369.gbk
92553849257702823180Island text1.5208618.965835.3027Neighbours21+2553849.gbk
102582674260159918926Island text2.0074119.602730.83Neighbours21+2582674.gbk
112926067*295626330197Island text1.8352521.360333.3979Neighbours21BLASTN2926067.gbk
123165143*318510519963Island text1.5723820.274837.0432Neighbours21BLASTN+3165143.gbk