Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_008537: Arthrobacter sp. FB24 plasmid 1, complete sequence

NCBI: NC_008537

Host Lineage: Arthrobacter; Arthrobacter; Micrococcaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Arthrobacter sp. FB24 was isolated from soil contaminated with heavy metals and aromatic solvents. This strain has a high degree of tolerance to chromium and other metals, may be radiation resistant and is a hydrocarbon degrader.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1125003067618177Island text1.6587617.155126.9308Neighbours11BLASTN+12500.gbk
213027815863428357Island text1.7248418.96814.9704Neighbours11BLASTN+130278.gbk