Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_008009: Acidobacteria bacterium Ellin345, complete genome

NCBI: NC_008009

Host Lineage: Koribacter versatilis; Koribacter; ; ; Acidobacteria; Bacteria

General Information: Common soil bacterium. This organism belongs to the phylum Acidobacteria. It is a gram-negative, highly capsulated, aerobic heterotroph that grows with a range of sugars, sugar polymers, and some organic acids. It was isolated from soil of an Australian pasture.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
11264791*129091226122Island text1.696728.051450.6787Neighbours11BLASTNIslandViewer 1264791.gbk
21408000*142939421395Island text1.6913832.139432.1642Neighbours11BLASTN+1408000.gbk
32430509*245504424536Island text1.6068427.505653.268Neighbours11BLASTNIslandViewer 2430509.gbk
44421992*444911527124Island text1.6018731.408529.0652Neighbours11BLASTN+IslandViewer 4421992.gbk
54479648450009320446Island text1.5551725.237135.9605Neighbours11BLASTN4479648.gbk
65044612507342128810Island text1.4682325.145922.3962Neighbours11IslandViewer 5044612.gbk
75139896*517800338108Island text1.5082226.242846.6273Neighbours11BLASTN+IslandViewer 5139896.gbk