Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_007984: Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete

NCBI: NC_007984

Host Lineage: Baumannia cicadellinicola; Baumannia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This newly discovered organism is an obligate endosymbiont of the leafhopper insect Homalodisca coagulata (Say), also known as the Glassy-Winged Sharpshooter, which feeds on the xylem of plants. The insect causes devastation to grape crops and may affect other grasses as it is a vector for the bacterial pathogen, Xylella fastidiosa, which can cause disease in grapevines. Leafhopper insect endosymbiont. Baumannia cicadellinicola is found within bacteriomes, specialized organs in sharpshooter leafhoppers (Cicadellinae), and is transmitted vertically from female to offspring. This bacterium is found within a red-pigmented bacteriome within the host. The bacteria-insect relationship is one of nutritional co-dependence: the bacteria provide important metabolites for the insect's nutritional requirements, and in turn receive a safe environment and metabolites from the insect.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
122103024292321894Island text1.5477716.011521.3912Neighbours21BLASTN221030.gbk