n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)
n0_4mer:D = Distance between local and global OU patterns
n0_4mer:PS = Distance between 2 strands of same DNA molecule
Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS
NC_007955: Methanococcoides burtonii DSM 6242, complete genome
NCBI: NC_007955
Host Lineage: Methanococcoides burtonii; Methanococcoides; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea
General Information: Psychrotolerant methanogenic archeon. This organism is a strictly anaerobic, slightly halophilic archeon that was isolated from the anoxic hypolimnion (layer of cold noncirculating water below the thermocline) of Ace Lake, Antarctica. Growth occurs at a temperature between 1.7-29.5 degrees C with optimal growth at 23.4 degrees C. In addition this organism requires 0.1-0.5 M NaCl and either magnesium sulfate or magnesium chloride at a concentration greater than 0.01 M for growth.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!