Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_007110: Rickettsia felis URRWXCal2 plasmid pRF, complete sequence

NCBI: NC_007110

Host Lineage: Rickettsia felis; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism was first isolated from cat fleas. It is an obligate intracellular pathogen and is transmitted transovarially in fleas. It is found associated with some human illnesses, and belongs to the spotted-fever group of Rickettsia.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
112626026260Island text1.9736118.312634.8945Neighbours21BLASTN+1.gbk