Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_006461: Thermus thermophilus HB8, complete genome

NCBI: NC_006461

Host Lineage: Thermus thermophilus; Thermus; Thermaceae; Thermales; Deinococcus-Thermus; Bacteria

General Information: This thermophilic non-acidophilic organism was originally isolated from a hot spring in Japan. Thermophilic bacterium. This species is extremely thermophilic and has been useful in analyzing bacterial life and biochemical processes under high temperature as well as being a source of thermophilic enzymes.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1605249*62783222584Island text1.6878116.026919.2039Neighbours11BLASTN+605249.gbk
295381797653122715Island text1.4775717.321315.1602Neighbours11BLASTN+953817.gbk