Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_003276: Nostoc sp. PCC 7120 plasmid pCC7120alpha, complete sequence

NCBI: NC_003276

Host Lineage: Nostoc; Nostoc; Nostocaceae; Nostocales; Cyanobacteria; Bacteria

General Information: Photosynthesis, Nitrogen fixation. Filamentous, heterocyst-forming cyanobacterium.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
125221727509922883Island text1.9271724.849442.0704Neighbours21BLASTN+252217.gbk