Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_002978: Wolbachia endosymbiont of Drosophila melanogaster, complete genome

NCBI: NC_002978

Host Lineage: Wolbachia endosymbiont of Drosophila melanogaster; Wolbachia; Anaplasmataceae; Rickettsiales; Proteobacteria; Bacteria

General Information: Wolbachia endosymbiont of Drosophila melanogaster. Fruitfly endosymbiont. This group of bacteria are associated with a variety of invertebrate species, some as pathogens, some in a symbiotic or other type of relationship. Typically these organisms are transmitted maternally from mother to daughter transovarially (through the egg) although these bacteria can affect their hosts reproductive capabilities in order to enhance transmission. The net outcome is the increase of hosts carrying the bacteria in the next generation, thereby increasing transmission. Wolbachia endosymbiont of Drosophila melanogaster is an obligate intracellular endosymbiont of the fruit fly Drosophila melanogaster.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
14973*3067725705Island text1.8346822.622540.2929Neighbours21BLASTN4973.gbk
220087822003219155Island text1.7305417.868429.3367Neighbours21BLASTN200878.gbk
323408226090426823Island text3.5889416.889632.1294Neighbours21BLASTN+IslandViewer 234082.gbk
4480707*50575525049Island text2.6157418.157830.5193Neighbours21BLASTNIslandViewer 480707.gbk
554945457728327830Island text1.8449717.974228.691Neighbours21BLASTN+549454.gbk
6618723*65300434282Island text3.2678121.220537.5742Neighbours21BLASTN+IslandViewer 618723.gbk
7918000*94009922100Island text1.6787717.181429.2484Neighbours21BLASTN918000.gbk