n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)
n0_4mer:D = Distance between local and global OU patterns
n0_4mer:PS = Distance between 2 strands of same DNA molecule
Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS
NC_002689: Thermoplasma volcanium GSS1, complete genome
NCBI: NC_002689
Host Lineage: Thermoplasma volcanium; Thermoplasma; Thermoplasmataceae; Thermoplasmatales; Euryarchaeota; Archaea
General Information: This strain is the type strain for this species, and was isolated from a solfataric (volcanic area that gives off sulfuric gases) field. Thermophilic archaea. This organism is a thermophilic, acidophilic, archaea that was isolated from acidic hydrothermal vents on the shore of Aeolian Island of Vulcano, Italy. Growth of this facultative aerobe occurs at temperatures of 33-67°C with optimal at 60°C and pH of 1.0-4.0 (optimal 2.0).
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!