n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)
n0_4mer:D = Distance between local and global OU patterns
n0_4mer:PS = Distance between 2 strands of same DNA molecule
Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS
NC_002578: Thermoplasma acidophilum DSM 1728, complete genome
NCBI: NC_002578
Host Lineage: Thermoplasma acidophilum; Thermoplasma; Thermoplasmataceae; Thermoplasmatales; Euryarchaeota; Archaea
General Information: Thermophilic archaea. This organism is a thermophilic, acidophilic, archaea that was isolated from a self-heating coal refuse pile in southwestern Indiana. This facultative aerobe grows at temperatures 45-63 degrees C with optimal growth at 59 degrees C and pH of 0.5-4 (optimal pH 2.0).
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!